Index A | C | D | E | G | I | M | N | P | R | S | W A ase_to_molecule() (in module irmsd) C cell (irmsd.Molecule attribute) compute_axis_and_print() (in module irmsd) compute_canonical_and_print() (in module irmsd) compute_cn_and_print() (in module irmsd) compute_irmsd_and_print() (in module irmsd) compute_quaternion_rmsd_and_print() (in module irmsd) copy() (irmsd.Molecule method) cregen() (in module irmsd) D delta_irmsd_list_molecule() (in module irmsd) E energy (irmsd.Molecule attribute) G get_atomic_numbers() (irmsd.Molecule method) get_axis() (in module irmsd) (irmsd.Molecule method) get_axis_ase() (in module irmsd) get_axis_rdkit() (in module irmsd) get_canonical() (irmsd.Molecule method) get_canonical_ase() (in module irmsd) get_canonical_fortran() (in module irmsd) get_canonical_rdkit() (in module irmsd) get_chemical_formula() (irmsd.Molecule method) get_chemical_symbols() (irmsd.Molecule method) get_cn() (irmsd.Molecule method) get_cn_ase() (in module irmsd) get_cn_fortran() (in module irmsd) get_cn_rdkit() (in module irmsd) get_energies_from_molecule_list() (in module irmsd) get_irmsd() (in module irmsd) get_irmsd_ase() (in module irmsd) get_irmsd_molecule() (in module irmsd) get_irmsd_rdkit() (in module irmsd) get_positions() (irmsd.Molecule method) get_potential_energy() (irmsd.Molecule method) get_quaternion_rmsd_fortran() (in module irmsd) get_rmsd_ase() (in module irmsd) get_rmsd_molecule() (in module irmsd) get_rmsd_rdkit() (in module irmsd) I info (irmsd.Molecule attribute) irmsd module M module irmsd Molecule (class in irmsd) molecule_to_ase() (in module irmsd) molecule_to_rdkit() (in module irmsd) N natoms (irmsd.Molecule property) P pbc (irmsd.Molecule attribute) positions (irmsd.Molecule attribute) prune() (in module irmsd) R rdkit_to_molecule() (in module irmsd) read_structures() (in module irmsd) run_cregen_and_print() (in module irmsd) S set_atomic_numbers() (irmsd.Molecule method) set_positions() (irmsd.Molecule method) set_potential_energy() (irmsd.Molecule method) sort_get_delta_irmsd_and_print() (in module irmsd) sort_structures_and_print() (in module irmsd) sorter_irmsd() (in module irmsd) sorter_irmsd_ase() (in module irmsd) sorter_irmsd_molecule() (in module irmsd) sorter_irmsd_rdkit() (in module irmsd) symbols (irmsd.Molecule attribute) W write_structures() (in module irmsd)